Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_1349
nitrogen source	Ethanolamine (N)	-2.3
nitrogen source	Ethanolamine (N)	-2.1
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-1.5
pH	Valerolactone (C) pH 6.5	-1.4
carbon source	carbon source 4-vinylphenol 0.1 mM	-1.0
pH	pH 8	-0.9
reactor	40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO.	-0.9
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO.	-0.9
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.9
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.8
carbon source	ferulate (C); with MOPS	-0.8
carbon source	Delta-Decalactone (C)	-0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7
phage	P. put South MOI 10	-0.7
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	-0.7
carbon source	D-Glucose (C)	-0.7
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM	-0.7
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-0.7
stress	NaCl stress 250 mM	-0.7
carbon source	Myristic (C)	-0.7
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.7
phage	P. putida South MOI 10	+0.7
phage	P. putida PUT10 MOI 1	+0.7
phage	PUT 8 MOI 1	+0.7
nitrogen source	2,6-diaminopimelic (N)	+0.7
temperature shift	Temperature shift 30_to_21; with MOPS	+0.7
phage	P. putida South MOI 1	+0.7
stress	Growth with Chloride 200 mM; with MOPS	+0.9
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+1.2
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