Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1294
nitrogen source	NAG (N); with MOPS	-6.3
carbon source	Vanillin (C)	-5.0
carbon source	Vanillin (C)	-4.1
nitrogen source	nitrate (N)	-3.8
nitrogen source	nitrate (N)	-3.8
carbon source	Vanillin (C)	-3.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-3.2
nitrogen source	nitrogen source nitrate 20mM	-2.9
nitrogen source	nitrate (N)	-2.7
carbon source	3-methyl-1-butanol 0.25 vol% (C)	-2.6
nitrogen source	Nicotinic Acid (N)	-2.6
nitrogen source	nitrogen source nitrate 5mM	-2.5
nitrogen source	nitrogen source nitrate 5mM	-2.4
carbon source	Vanillin (C)	-2.4
nitrogen source	nitrogen source nitrate 20mM	-2.3
carbon source	1,5-Pentanediol (C)	-1.9
carbon source	Soil Extract with Trisodium citrate 10 mM; 30C	-1.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-1.8
nitrogen source	Nicotinic Acid (N)	-1.7
nitrogen source	no extra (N); with MOPS	-1.6
carbon source	Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB	-1.6
carbon source	rac-3-Hydroxypentanoic Acid (C)	-1.5
nitrogen source	NAG (N)	-1.5
carbon source	Soil Extract with D-Glucose 10 mM; 30C	-1.5
no phage control	No phage control	-1.5
carbon source	Soil Extract with Trisodium citrate 10 mM; 30C	-1.5
carbon source	1,3-Butandiol (C)	-1.5
nitrogen source	nitrate (N)	-1.5
carbon source	Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB	-1.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.8
		remove PP_1294