Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1284
no stress control	Growth with no stress	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.7
phage	P. putida Sci Big MOI 0.1	-0.6
phage	PUT 8 MOI 1	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.5
carbon source	ferulate (C); with MOPS	-0.5
phage	P. putida Sci small MOI 0.1	-0.4
r2a control	R2A control	-0.4
carbon source	Tween 20 (C)	-0.4
phage	P. putida South MOI 1	-0.4
pH	Valerolactone (C) pH 6.5	-0.4
phage	P. put PUT 10 MOI 0.1	-0.4
nitrogen source	Ammonium chloride (N)	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.4
temperature	Growth at 30C; with MOPS	+0.4
pH	Growth at pH6 and (C) Trisodium citrate	+0.4
stress	MOPS minimal media_Glucose20mM with Chloride 200 mM	+0.4
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.4
carbon source	Tween 20 (C)	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4
pH	D-Glucose (C) pH 6	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	+0.5
nitrogen source	NAG (N); with MOPS	+0.5
carbon source	4-Hydroxyvalerate (C) (40mM)	+0.5
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
carbon source	3-methyl-1-butanol 0.1 vol% (C)	+0.6
pH	Growth at pH7 and (C) D-Glucose	+0.7
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