Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1255
carbon source Hydroxy-L-Proline (C) -8.6
carbon source Hydroxy-L-Proline (C) -8.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.1
pH Growth at pH6 and (C) Trisodium citrate -1.5
phage P. putida Sci small MOI 0.1 -1.3
phage P. putida Sci Big MOI 0.1 -1.2
pH Growth at pH6 and (C) D-Glucose -1.2
nitrogen source D-2-Aminobutyric (N) -1.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.0
nitrogen source Urea (N); with MOPS -1.0
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.0
phage P. putida PUT10 MOI 0.1 -1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9
carbon source Trisodium citrate (C) -0.9
carbon source 2-Keto-D-gluconic hemicalcium salt (C) -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.9
phage P. putida Missley MOI 0.1 -0.9
temperature shift Temperature shift 30_to_4; with MOPS -0.9
temperature shift Temperature shift 10_to_30; with MOPS -0.8
phage P. putida PUT10 MOI 1 -0.8
nitrogen source NAG (N); with MOPS -0.8
phage PUT8 MOI 0.1 -0.8
temperature shift Temperature shift 30_to_21; with MOPS -0.8
stress Butanol 0.6 vol% -0.8
carbon source D-Glucose (C) with 20AA_mix_minus_His +0.8
carbon source ferulate (C); with MOPS +0.8
carbon source D-Glucose (C); with MOPS +0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.0
nitrogen source 2,6-diaminopimelic (N) +1.2
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PP_1255