Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1236
carbon source L-Lysine 10 mM (C) -1.7
nitrogen source Propiolactam (N) -1.6
carbon source Vanillin (C) -1.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.0
carbon source L-Lysine (C) -1.0
carbon source 3-methyl-1-butanol (C) -1.0
carbon source 3-methyl-1-butanol (C) -1.0
phage P. put South MOI 1 -0.9
carbon source Vanillin (C) -0.8
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8
carbon source Delta-Decalactone (C) +0.8
reactor_pregrowth Adaptation in M9 media timecourse 4; day 3 +0.9
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.9
carbon source Levulinic Acid (C) +0.9
carbon source ferulate (C); with MOPS +0.9
carbon source Levulinic Acid (C) +0.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.9
carbon source Delta-Undecalactone (C) +1.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.1
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3
nitrogen source D-2-Aminobutyric (N) +1.3
nitrogen source DL-2-Aminobutyric (N) +1.4
nitrogen source DL-2-Aminobutyric (N) +1.4
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.5
nitrogen source 2,6-diaminopimelic (N) +1.6
nitrogen source D-2-Aminobutyric (N) +1.9
carbon source 4-Hydroxyvalerate (C) (40mM) +2.2
carbon source 4-Hydroxyvalerate (C) (40mM) +2.6
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PP_1236