Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1227
pH	pH 6	-0.7
pH	Valerolactone (C) pH 6.5	-0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6
nitrogen source	nitrite (N)	-0.5
carbon source	D-Glucose (C)	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.5
carbon source	carbon source Bisabolene 48.9 mM	-0.5
carbon source	Tween 20 (C)	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-0.4
pH	Growth at pH6 and (C) Trisodium citrate	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.4
carbon source	Delta-Decalactone (C)	-0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4
carbon source	carbon source 3-O-methyl-glucose 10 mM	-0.4
temperature	Growth at 30C	-0.3
nitrogen source	nitrogen source nitrate 5mM	+0.3
time series	Timeseries; MIN condition; Bioreplicate 1; Time 7hrs; Measurement	+0.4
stress	R2A with Polymyxin B sulfate 0.001 mg/ml	+0.4
carbon source	5-Aminovaleric 10 mM (C)	+0.4
carbon source	ferulate (C); with MOPS	+0.4
nitrogen source	2,6-diaminopimelic (N)	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.4
stress	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.4
phage	P. putida South MOI 1	+0.4
phage	P. put South MOI 0.1	+0.4
nitrogen source	nitrogen source nitrite 0.5mM	+0.5
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