Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1216
phage P. put South MOI 10 -5.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -5.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -4.9
phage PUT 8 MOI 1 -4.9
carbon source 3-methyl-1-butanol 0.1 vol% (C) -4.8
carbon source benzoic (C) -4.8
nitrogen source Urea (N); with MOPS -4.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -4.4
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -4.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -4.2
carbon source 3-methyl-1-butanol (C) -4.1
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.9
carbon source D-Lysine 10 mM (C) -3.6
carbon source 3-methyl-1-butanol (C) -3.5
nitrogen source L-Cysteine (N) -3.5
carbon source 1,5-Pentanediol (C) -3.4
stress Growth with Chloride 500 mM; with MOPS -3.3
phage P. putida South MOI 0.1 -3.3
carbon source Oleic (C) -3.3
carbon source D-Glucose (C); with MOPS -3.2
phage PUT8 MOI 0.1 -3.2
carbon source Delta-Undecalactone (C) -3.2
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -3.1
nitrogen source nitrite (N) -3.1
nitrogen source L-Cysteine (N) -3.1
carbon source propionate (C) -3.0
carbon source Delta-Decalactone (C) -3.0
carbon source Delta-Dodecalactone (C) -3.0
carbon source Protocatechuic Acid (C) -3.0
stress Growth with Chloride 500 mM; with MOPS -3.0
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PP_1216