Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1210
nitrogen source	2,6-diaminopimelic (N)	-1.1
temperature shift	Temperature shift 10_to_30; with MOPS	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.8
pH	D-Glucose (C) pH 6.5	-0.8
pH	D-Glucose (C) pH 6	-0.8
carbon source	L-Glutamic (C)	-0.8
temperature	Growth at 25C; with MOPS	-0.7
carbon source	Myristic (C)	-0.7
carbon source	Tween 20 (C)	-0.7
r2a control with 0.2% methanol	R2A control with 0.2% methanol	-0.7
nitrogen source	Ammonium chloride (N); with MOPS	-0.7
carbon source	D-Lysine 10 mM (C)	-0.7
phage	P. putida PUT10 MOI 10	-0.6
carbon source	Valeric (C)	-0.6
carbon source	DL-3-Hydroxybutyric (C)	+0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	+0.6
carbon source	Delta-Nonalactone (C)	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.6
pH	Valerolactone (C) pH 6.5	+0.6
carbon source	L-Lysine (C)	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.7
phage	P. put South MOI 10	+0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8
carbon source	L-Leucine (C)	+0.8
nitrogen source	nitrogen source nitrite 0.5mM	+0.8
carbon source	D-Glucose (C)	+0.8
nitrogen source	Propiolactam (N)	+0.8
no stress control	Growth with no stress	+0.9
nitrogen source	NAG (N); with MOPS	+1.0
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