Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1197
nitrogen source Propandiamine (N) -0.8
nitrogen source D-2-Aminobutyric (N) -0.7
nitrogen source D-2-Aminobutyric (N) -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5
carbon source 2-Keto-D-gluconic hemicalcium salt (C) -0.5
carbon source Ethyl decanoate (C) -0.5
pH Growth at pH9 and (C) Trisodium citrate -0.4
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.4
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM +0.4
micoeukaryotes Acanthamoeba sp., muxed culture-2 +0.5
phage P. put PUT 10 MOI 10 +0.5
carbon source Glucose (C) (20mM) +0.5
temperature Growth at 30C; with MOPS +0.5
pH pH 7 +0.5
phage P. put PUT 10 MOI 0.1 +0.5
nitrogen source nitrogen source Ammonium chloride 20mM +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.5
phage P. putida Sci small MOI 0.1 +0.5
phage P. putida PUT10 MOI 10 +0.5
phage PUT8 MOI 0.1 +0.6
carbon source 4-Hydroxyvalerate (C) (40mM) +0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7
carbon source 4-Hydroxyvalerate (C) (40mM) +0.7
carbon source butyrate (C) +0.7
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.7
carbon source ferulate (C); with MOPS +0.7
phage P. putida South MOI 10 +0.8
carbon source ferulate (C); with MOPS +0.8
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PP_1197