Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_1163
carbon source	carbon source 4-vinylphenol 0.01 mM	-0.5
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.5
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-0.4
temperature	Growth at 25C	-0.4
pH	Growth at pH7 and (C) Trisodium citrate	-0.4
pH	pH 9	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.4
pH	Growth at pH8 and (C) Trisodium citrate	-0.4
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM	-0.3
pH	pH 4	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.3
nitrogen source	Caprolactam (N)	-0.3
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.3
stress	3-methyl-1-butanol 0.4 vol%	+0.3
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3
phage	P. putida Sci small MOI 0.1	+0.3
temperature shift	Temperature shift 30_to_34; with MOPS	+0.3
temperature shift	Temperature shift 30_to_25; with MOPS	+0.3
phage	P. putida Missley MOI 0.1	+0.4
supernatant	Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x and Ferric chloride 1 uM	+0.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
nitrogen source	Urea (N)	+0.4
phage	P. putida Sci small MOI 0.1	+0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.4
temperature shift	Temperature shift 30_to_21; with MOPS	+0.4
r2a control with 0.2% methanol	R2A control with 0.2% methanol	+0.5
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.5
stress	Growth with Chloride 500 mM; with MOPS	+0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
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