Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1162
nitrogen source Ammonium chloride (N) -0.6
pH Growth at pH9 and (C) Trisodium citrate -0.5
carbon source D-Glucose (C) -0.5
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.5
phage moi 100 Time6-phageFRS -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4
phage PUT 8 MOI 1 -0.4
carbon source 2-Methylbutanoic (C) -0.4
carbon source Vanillin (C) -0.4
carbon source carbon source 3-O-methyl-glucose 50 mM -0.4
carbon source 4-Aminobutyric 10 mM (C) -0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4
carbon source Decanoic (C) -0.4
pH Growth at pH9 and (C) D-Glucose -0.4
carbon source D-Glucose (C) +0.3
carbon source Lignin Monomers (C) +0.4
toxin pUC18_phdP1_pSU18T_docP1 +0.4
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM +0.4
carbon source 2-Keto-D-gluconic hemicalcium salt (C) +0.4
nitrogen source Urea (N) +0.4
carbon source Ethyl decanoate and D-Glucose (C)s +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
phage P. putida PUT10 MOI 1 +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.4
phage P. putida Sci small MOI 0.1 +0.5
phage P. putida South MOI 10 +0.5
carbon source D-Glucaric (C) +0.6
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PP_1162