Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group	Condition	PP_1160
pH	Growth at pH6 and (C) D-Glucose	-0.9
carbon source	Myristic (C)	-0.8
nitrogen source	D-2-Aminobutyric (N)	-0.7
carbon source	Valeric (C)	-0.6
pH	Growth at pH8 and (C) Trisodium citrate	-0.6
temperature	Growth at 30C; with MOPS	-0.6
carbon source	L-Alanine (C)	-0.6
pH	Growth at pH8 and (C) D-Glucose	-0.6
temperature shift	Temperature shift 10_to_30; with MOPS	-0.5
nitrogen source	nitrate (N)	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
pH	Growth at pH7 and (C) D-Glucose	-0.4
carbon source	5-Aminovaleric 10 mM (C)	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.4
temperature shift	Temperature shift 10_to_21; with MOPS	-0.4
nitrogen source	no extra (N); with MOPS	-0.4
temperature shift	Temperature shift 10_to_30; with MOPS	-0.4
pH	Growth at pH6 and (C) Trisodium citrate	-0.4
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	+0.4
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	+0.4
carbon source	L-Phenylalanine 5 mM (C)	+0.4
carbon source	D-Glucose (C) 2.5 mM	+0.4
phage	P. putida Sci small MOI 0.1	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.5
phage	P. putida Missley MOI 0.1	+0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.7
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.9
		remove PP_1160