Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1145
stress	MOPS minimal media_Glucose20mM with Lithium chloride 200 mM	-1.1
carbon source	Valerolactam 10 mM (C)	-1.1
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs	-1.0
stress	MOPS minimal media_Glucose20mM with Lithium chloride 200 mM	-0.9
in planta	Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.9
carbon source	4-Hydroxyvalerate (C) (40mM)	-0.9
temperature shift	Temperature shift 30_to_4	-0.9
carbon source	5-Aminovaleric 10 mM (C)	-0.9
carbon source	5-Aminovaleric 10 mM (C)	-0.8
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.8
carbon source	4-Hydroxyvalerate (C) (40mM)	-0.8
phage	P. put PUT 10 MOI 10	-0.8
phage	P. putida South MOI 10	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.7
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.7
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-0.7
temperature shift	Temperature shift 30_to_4; with MOPS	-0.7
phage	P. putida PUT10 MOI 10	-0.7
temperature shift	Temperature shift 30_to_4	-0.7
carbon source	Glycerol (C)	-0.6
phage	P. putida PUT10 MOI 10	-0.6
phage	P. put South MOI 10	-0.6
pH	D-Glucose (C) pH 7	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.6
phage	P. putida Missley MOI 0.1	+0.6
reactor	24hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO.	+0.7
phage	P. putida PUT 7 MOI 1	+0.7
reactor	40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO.	+0.7
reactor	48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO.	+0.8
nitrogen source	Propandiamine (N)	+1.0
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