Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_1143
pH	Growth at pH7 and (C) D-Glucose	-1.4
temperature shift	Temperature shift 30_to_25; with MOPS	-0.9
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.8
temperature shift	Temperature shift 30_to_21	-0.8
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.7
pH	Growth at pH6 and (C) D-Glucose	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.7
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.6
carbon source	D-Glucose (C) with 20AA_mix_minus_Glu	-0.6
temperature shift	Temperature shift 30_to_4; with MOPS	-0.6
pH	Growth at pH9 and (C) Trisodium citrate	-0.6
nitrogen source	nitrite (N)	-0.6
carbon source	D-Glucose (C); with MOPS	-0.6
temperature	Growth at 30C; with MOPS	-0.5
nitrogen source	Uracil (N)	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
carbon source	D-Glucose; D-Xylose; p-Coumaric; benzoic acid (C)	-0.5
nitrogen source	NAG (N); with MOPS	+0.5
stress	MOPS minimal media_Glucose20mM with Chloride 200 mM	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.5
carbon source	Quinic Acid (C)	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+0.5
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	+0.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
phage	P. putida PUT 7 MOI 1	+0.6
carbon source	ferulate (C); with MOPS	+0.6
nitrogen source	2,6-diaminopimelic (N)	+0.8
nitrogen source	D-2-Aminobutyric (N)	+0.9
phage	P. putida Sci small MOI 0.1	+1.0
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