Fitness for 1 genes in Pseudomonas putida KT2440

Add gene:

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group Condition PP_1125
stress Formaldehyde 0.03125 vol% -1.4
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8
micoeukaryotes C.elegans, mixed culture-1 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4
stress Butyrolactam 2 vol% -0.4
carbon source Valerolactone (C) +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4
phage P. put PUT 10 MOI 1 +0.4
stress Geraniol 1 vol% +0.4
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
phage P. putida South MOI 10 +0.4
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +0.4
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
phage PUT8 MOI 0.1 +0.4
phage P. putida PUT 7 MOI 1 +0.4
carbon source D-Glucose (C) +0.5
phage P. putida PUT10 MOI 10 +0.5
phage P. put South MOI 1 +0.5
phage P. putida PUT10 MOI 0.1 +0.5
phage P. put South MOI 1 +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.5
phage P. putida PUT10 MOI 10 +0.5
phage P. putida South MOI 0.1 +0.5
phage P. putida PUT10 MOI 1 +0.5
phage P. putida Missley MOI 0.1 +0.5
phage P. putida South MOI 1 +0.5
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +0.6
nitrogen source D-2-Aminobutyric (N) +0.6
phage P. putida South MOI 0.1 +0.6
phage P. putida South MOI 10 +0.6
remove
PP_1125