Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1093
carbon source 4-Methyl-2-oxopentanoic (C) -0.9
nitrogen source 2,6-diaminopimelic (N) -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6
carbon source ferulate (C); with MOPS -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6
nitrogen source Ammonium chloride (N) -0.6
temperature shift Temperature shift 30_to_25 -0.5
pH Growth at pH6 and (C) D-Glucose -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5
pH Growth at pH6 and (C) Trisodium citrate -0.5
temperature shift Temperature shift 30_to_25 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5
temperature shift Temperature shift 30_to_10 -0.5
carbon source butyrate (C) -0.5
pH Valerolactone (C) pH 6.5 -0.5
nitrogen source Ammonium chloride (N) -0.4
carbon source Acetate Carbon Source (5mM) -0.4
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4
stress Growth with Chloride 500 mM -0.4
carbon source Mucic (C) -0.4
nitrogen source nitrogen source nitrate 5mM +0.4
nitrogen source NAG (N); with MOPS +0.4
temperature shift Temperature shift 30_to_25; with MOPS +0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.5
carbon source carbon source 3-O-methyl-glucose 10 mM +0.6
temperature Growth at 30C; with MOPS +0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.7
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PP_1093