Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1084
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.8
nitrogen source nitrogen source nitrate 5mM -0.7
nitrogen source Propiolactam (N) -0.7
carbon source 4-Hydroxyvalerate (C) (40mM) -0.7
carbon source 2-Methylbutanoic (C) -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.6
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6
carbon source D-Mannose (C) -0.6
nitrogen source Urea (N) -0.6
stress 2-Piperidinone 3 vol% -0.6
carbon source carbon source Glycerol 108.6 mM +0.6
carbon source carbon source 4-vinylphenol 0.1 mM +0.6
carbon source 3-methyl-1-butanol (C) +0.6
nitrogen source NAG (N); with MOPS +0.6
temperature Growth at 30C; with MOPS +0.6
carbon source L-Leucine (C) +0.6
carbon source carbon source Bisabolol 45 mM +0.6
phage P. putida Sci small MOI 0.1 +0.7
pH Growth at pH7 and (C) D-Glucose +0.7
carbon source L-Leucine (C) +0.7
carbon source carbon source 3-O-methyl-glucose 10 mM +0.7
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.7
nitrogen source D-2-Aminobutyric (N) +0.9
nitrogen source D-2-Aminobutyric (N) +0.9
carbon source 3-methyl-1-butanol 0.1 vol% (C) +1.4
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PP_1084