Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1077
phage PUT8 MOI 0.1 -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.8
phage P. putida South MOI 10 -0.7
phage P. put PUT 10 MOI 0.1 -0.6
stress R2A with Fusaric 480 ug/mL -0.6
stress Growth with Chloride 500 mM; with MOPS -0.6
stress Growth with Chloride 200 mM -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5
nitrogen source Urea (N) -0.5
nitrogen source Propiolactam (N) -0.5
temperature Growth at 30C; with MOPS -0.4
carbon source ferulate (C); with MOPS -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4
phage P. putida Sci Big MOI 0.1 -0.4
carbon source D-Glucuronic gamma lactone (C) +0.4
temperature shift Temperature shift 30_to_25; with MOPS +0.4
stress R2A with Polymyxin B sulfate 0.001 mg/ml +0.4
carbon source Valerolactone (C) +0.4
carbon source Lignin Monomers (C) +0.4
nitrogen source 2,6-diaminopimelic (N) +0.4
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5
nitrogen source Propandiamine (N) +0.5
carbon source Lignin Monomers (C) +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5
nitrogen source NAG (N); with MOPS +0.6
nitrogen source D-2-Aminobutyric (N) +0.7
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8
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PP_1077