Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1062
carbon source Myristic (C) -5.5
nitrogen source D-2-Aminobutyric (N) -3.5
pH Growth at pH7 and (C) D-Glucose -3.2
nitrogen source NAG (N); with MOPS -2.4
temperature shift Temperature shift 10_to_25; with MOPS -1.8
pH Growth at pH6 and (C) D-Glucose -1.7
carbon source carbon source D-Glucose 55.5 mM -1.7
phage P. putida PUT 7 MOI 1 -1.5
nitrogen source nitrogen source nitrite 1mM -1.5
carbon source D-Glucose (C); with MOPS -1.5
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM -1.4
pH Growth at pH7 and (C) D-Glucose -1.4
stress Growth with Chloride 200 mM; with MOPS -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.3
temperature Growth at 34C -1.3
pH Growth at pH9 and (C) Trisodium citrate -1.3
carbon source p-Coumaric (C) -1.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.3
phage PUT8 MOI 10 -1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.2
pH Valerolactone (C) pH 6.5 -1.2
stress MOPS minimal media_Glucose20mM with PHB-HV-HH 0.1 mg/mL +1.2
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL +1.2
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +1.2
r2a control R2A control +1.2
carbon source DL-3-Hydroxyisobutyric (C) +1.2
time series Timeseries; MIN condition; Bioreplicate 1; Time 7hrs; Measurement +1.3
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4
stress Isobutyl alcohol 0.6 vol% +1.4
stress MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL +1.4
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PP_1062