Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1060
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.8
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7
stress Growth with Chloride 500 mM; with MOPS -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6
temperature shift Temperature shift 10_to_25; with MOPS -0.6
carbon source carbon source 3-O-methyl-glucose 50 mM -0.5
carbon source 5-Aminovaleric 10 mM (C) -0.5
nitrogen source no extra (N); with MOPS -0.5
carbon source carbon source 3-O-methyl-glucose 10 mM -0.5
carbon source D-Glucose (C) -0.5
pH Valerolactone (C) pH 6.5 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5
temperature shift Temperature shift 10_to_30; with MOPS -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM +0.4
stress R2A with Fusaric 240 ug/mL +0.4
nitrogen source nitrogen source nitrate 20mM +0.4
phage P. putida Missley MOI 0.1 +0.4
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
carbon source 1,3-Hexanediol (C) +0.5
nitrogen source D-2-Aminobutyric (N) +0.5
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5
carbon source Vanillin (C) +0.6
nitrogen source nitrogen source nitrite 1mM +0.6
nitrogen source nitrogen source nitrate 5mM +0.6
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
phage PUT 8 MOI 1 +0.6
nitrogen source D-2-Aminobutyric (N) +0.6
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PP_1060