Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_1027
carbon source 3-methyl-1-butanol (C) -1.9
carbon source 3-methyl-1-butanol (C) -1.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1
stress Growth with Chloride 200 mM -1.0
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.7
carbon source Vanillin (C) -0.7
carbon source 1-Pentanol (C) -0.7
carbon source carbon source Glycerol 108.6 mM -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.7
carbon source Vanillin (C) -0.6
carbon source L-Leucine (C) -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.6
carbon source DL-3-Hydroxyisobutyric (C) -0.6
nitrogen source Propiolactam (N) -0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.5
micoeukaryotes C.elegans, mixed culture-1 -0.5
carbon source Lignin Monomers (C) -0.5
mixed community Putida_ML5X with Paraburkholderia sabiae T6SS mutant -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5
temperature shift Temperature shift 30_to_25; with MOPS +0.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
carbon source L-Lysine (C) +0.6
phage PUT 8 MOI 1 +0.6
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
carbon source Tween 20 (C) +0.7
carbon source 3-Hydroxydecanoic (C) +0.8
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PP_1027