Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_1000
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-3.7
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-2.9
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-2.5
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-2.5
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-2.4
supernatant control:fungal media	R2A with Vogels_fungal_media 0.2X	-2.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-2.2
stress	R2A with Fusaric 120 ug/mL	-2.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.1
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-2.1
r2a control	R2A control	-2.1
nitrogen source	nitrogen source nitrite 0.5mM	-2.1
r2a control with 0.2% methanol	R2A control with 0.2% methanol	-2.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-2.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-2.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.0
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-2.0
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	-2.0
supernatant control:fungal media	R2A with Vogels_fungal_media 0.8X	-2.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-2.0
r2a control	R2A control	-1.9
phage	P. putida Missley MOI 0.1	-1.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-1.8
r2a control	R2A control	-1.8
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.7
nitrogen source	nitrogen source nitrite 0.5mM	-1.7
nitrogen source	nitrogen source nitrate 20mM	-1.7
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-1.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-1.7
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X	-1.7
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