Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0991
phage P. putida Sci Big MOI 0.1 -1.0
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.8
nitrogen source nitrogen source nitrite 0.5mM -0.7
phage P. putida Missley MOI 0.1 -0.6
carbon source D-Glucose (C) -0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5
carbon source D-Glucose (C) -0.5
carbon source L-Lysine (C) -0.5
nitrogen source 2,6-diaminopimelic (N) -0.5
phage P. putida PUT 7 MOI 1 -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5
carbon source Hexanoic (C) -0.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5
phage P. putida Sci small MOI 0.1 -0.5
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5
supernatant Supernatant; Burkholderia bryophila 376MFSha3.1 spent media 0.5x +0.5
carbon source carbon source 4-vinylphenol 0.01 mM +0.5
pH pH 7 +0.5
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5
nitrogen source NAG (N); with MOPS +0.5
stress Growth with Chloride 200 mM; with MOPS +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.6
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6
carbon source Delta-Nonalactone (C) +0.6
nitrogen source D-2-Aminobutyric (N) +0.6
pH Growth at pH6 and (C) D-Glucose +0.8
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PP_0991