Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0957
nitrogen source	nitrogen source nitrate 5mM	-4.9
nitrogen source	nitrogen source nitrite 0.5mM	-4.9
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-4.7
pH	Growth at pH9 and (C) Trisodium citrate	-4.7
nitrogen source	nitrate (N)	-4.5
nitrogen source	NAG (N); with MOPS	-4.5
temperature shift	Temperature shift 30_to_25; with MOPS	-4.4
phage	P. putida Sci small MOI 0.1	-4.3
carbon source	5-Aminovaleric 10 mM (C)	-3.3
pH	Growth at pH9 and (C) D-Glucose	-2.9
carbon source	Valeric (C)	-2.7
stress	Growth with Chloride 500 mM; with MOPS	-2.7
pH	pH 7	-2.7
temperature shift	Temperature shift 10_to_30	-2.6
carbon source	carbon source Glycerol 108.6 mM	-2.5
carbon source	D-Glucose (C)	-2.5
nitrogen source	Ammonium chloride (N)	-2.3
reactor	48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO.	-2.3
stress	Growth with Chloride 500 mM; with MOPS	-2.2
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-2.2
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-2.1
reactor	48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay	-2.1
carbon source	Rhamnogalacturonan - from potato (C)	-2.0
temperature shift	Temperature shift 30_to_10; with MOPS	-2.0
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO.	-1.9
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-1.9
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM	-1.9
carbon source	2,3-Butanediol (C)	-1.8
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.9
micoeukaryotes	Dictyostellum sp.mixed culture-2	+2.0
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