Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0944
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.0
nitrogen source NAG (N); with MOPS -0.9
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.8
phage P. putida Sci Big MOI 0.1 -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6
phage P. putida Missley MOI 0.1 -0.6
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5
phage P. putida PUT 7 MOI 1 -0.5
phage P. put South MOI 10 -0.5
stress Growth with Chloride 500 mM; with MOPS -0.5
carbon source Heptanoic (C) -0.4
carbon source 3-methyl-1-butanol 0.1 vol% (C) -0.4
carbon source D-Glucose (C); with MOPS -0.4
stress Growth with Chloride 500 mM; with MOPS +0.4
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.4
carbon source carbon source Glycerol 108.6 mM +0.4
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM +0.4
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
nitrogen source 2,6-diaminopimelic (N) +0.4
carbon source Ferulic Acid (C) +0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5
nitrogen source D-2-Aminobutyric (N) +0.5
carbon source carbon source 3-O-methyl-glucose 10 mM +0.5
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
carbon source carbon source D-Glucose 55.5 mM +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.6
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
carbon source Lignin Monomers (C) +0.7
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PP_0944