Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0927
carbon source 3-methyl-1-butanol 0.1 vol% (C) -2.8
carbon source 3-methyl-1-butanol (C) -2.2
carbon source Lignin Monomers (C) -2.1
carbon source 3-methyl-1-butanol (C) -1.6
carbon source Lignin Monomers (C) -1.2
carbon source Quinic Acid (C) -1.0
carbon source L-Arginine (C) -0.9
carbon source Succinic Acid (C) -0.8
carbon source Quinic Acid (C) -0.8
carbon source Succinic Acid (C) -0.7
carbon source 4-Aminobutyric 10 mM (C) -0.7
carbon source Ethanol (C) -0.5
carbon source Ethanol (C) -0.5
carbon source 5-Aminovaleric 10 mM (C) -0.5
carbon source Ethanol (C) -0.5
carbon source Rhamnogalacturonan - from potato (C) -0.4
carbon source 5-Aminovaleric 10 mM (C) -0.4
pH Growth at pH9 and (C) Trisodium citrate -0.4
carbon source D-Glucose (C) with 20AA_mix_minus_Val -0.4
nitrogen source NAG (N); with MOPS -0.4
carbon source ferulate (C); with MOPS -0.4
carbon source D-Glucose (C) with 20AA_mix_minus_Met -0.4
carbon source succinate (C) -0.4
pH pH 4 -0.3
carbon source D-Galacturonic Acid (C) -0.3
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3
carbon source D-Glucose (C) with 20AA_mix_minus_Thr +0.4
temperature shift Temperature shift 10_to_25; with MOPS +0.4
phage P. putida Sci small MOI 0.1 +0.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4
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PP_0927