Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0896
nitrogen source	2,6-diaminopimelic (N)	-1.1
nitrogen source	nitrogen source nitrite 1mM	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.7
phage	P. putida Sci Big MOI 0.1	-0.6
pH	pH 6	-0.6
carbon source	4-Hydroxyvalerate (C) (40mM)	-0.6
carbon source	L-Lysine (C)	-0.5
nitrogen source	NAG (N)	+0.5
stress	Butanol 0.6 vol%	+0.5
nitrogen source	nitrogen source nitrate 5mM	+0.5
reactor	48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO.	+0.5
temperature shift	Temperature shift 30_to_25; with MOPS	+0.6
carbon source	M9 minimal media_noCarbon with D-Glucose 10 mM; 30C; then outgrowth in LB	+0.6
carbon source	3-methyl-1-butanol 0.25 vol% (C)	+0.6
phage	P. putida PUT 7 MOI 1	+0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+0.6
pH	Growth at pH8 and (C) D-Glucose	+0.6
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM	+0.6
stress	Growth with Chloride 500 mM	+0.6
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.6
carbon source	ferulate (C); with MOPS	+0.6
temperature shift	Temperature shift 10_to_25; with MOPS	+0.7
pH	Growth at pH6 and (C) D-Glucose	+0.7
nitrogen source	nitrate (N)	+0.7
pH	Growth at pH6 and (C) Trisodium citrate	+0.7
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM	+0.7
temperature	Growth at 25C	+0.7
carbon source	ferulate (C); with MOPS	+0.8
nitrogen source	nitrate (N)	+1.1
temperature	Growth at 30C; with MOPS	+1.1
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