Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0887
nitrogen source D-2-Aminobutyric (N) -2.1
toxin pUC18_phdP1_pSU18T_docP1 -2.0
carbon source Delta-Nonalactone (C) -1.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.4
carbon source Delta-Decalactone (C) -1.3
carbon source ferulate (C); with MOPS -1.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.2
carbon source Delta-Decalactone (C) -1.2
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -1.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.2
stress Geraniol 1 vol% -1.1
micoeukaryotes Tetrahymena sp., Mixed culture-1 -1.1
carbon source 2-Methylbutanoic (C) -1.1
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -1.1
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -1.1
carbon source Valerolactone (C) -1.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -1.1
phage P. putida Sci Big MOI 0.1 -1.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.0
carbon source 2-Methylbutanoic (C) -1.0
carbon source Phenylacetic (C) -1.0
carbon source 3-methyl-1-butanol (C) -0.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.9
carbon source DL-3-Hydroxybutyric (C) -0.9
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PP_0887