Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0875
pH	Growth at pH6 and (C) D-Glucose	-0.8
pH	Growth at pH6 and (C) D-Glucose	-0.7
phage	P. putida Sci small MOI 0.1	-0.5
carbon source	D-Glucose (C)	-0.5
micoeukaryotes	Tetrahymena sp., Mixed culture-2	-0.4
carbon source	butyrate (C)	-0.4
pH	Growth at pH6 and (C) D-Glucose	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.4
pH	Growth at pH8 and (C) D-Glucose	-0.4
stress	3-methyl-3-butenol (pure) 0.25 vol%	-0.4
carbon source	Hexanoic (C)	-0.4
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.4
temperature	Growth at 30C; with MOPS	-0.4
pH	Valerolactone (C) pH 6.5	-0.3
phage	P. putida South MOI 10	-0.3
nitrogen source	nitrogen source nitrate 20mM	+0.3
carbon source	D-Glucose (C); with MOPS	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	+0.4
nitrogen source	nitrogen source nitrate 20mM	+0.4
carbon source	ferulate (C); with MOPS	+0.4
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+0.4
stress	R2A with Fusaric 240 ug/mL	+0.4
micoeukaryotes	Dictyostellum sp.mixed culture-2	+0.4
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
nitrogen source	NAG (N); with MOPS	+0.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
temperature	Growth at 10C; with MOPS	+0.5
pH	Valerolactone (C) pH 6.5	+0.5
nitrogen source	nitrogen source nitrite 0.5mM	+0.6
		remove PP_0875