Fitness for 1 genes in Pseudomonas putida KT2440

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Top 30 experiments (either direction), sorted by average fitness

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Group Condition PP_0859
nitrogen source D-2-Aminobutyric (N) -1.8
nitrogen source D-2-Aminobutyric (N) -1.2
micoeukaryotes C.elegans, mixed culture-1 -0.9
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.8
pH Growth at pH6 and (C) D-Glucose -0.8
carbon source 1,3-Hexanediol (C) -0.8
temperature Growth at 30C; with MOPS -0.8
temperature shift Temperature shift 30_to_21; with MOPS -0.7
micoeukaryotes C.elegans, mixed culture-2 -0.7
temperature shift Temperature shift 10_to_21; with MOPS -0.7
no stress control Growth with no stress -0.7
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.7
nitrogen source TNT (N) -0.6
nitrogen source Propiolactam (N) -0.6
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.6
micoeukaryotes Dictyostellum sp.mixed culture-1 -0.6
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v dodecane overlay -0.6
stress Growth with Chloride 500 mM -0.6
no stress control Growth with no stress +0.6
pH pH 9 +0.6
carbon source butyrate (C) +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7
carbon source Hexanoic (C) +0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9
carbon source Levulinic Acid (C) +1.1
carbon source Levulinic Acid (C) +1.2
carbon source Hexanoic (C) +2.1
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PP_0859