Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0858
pH pH 4 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5
temperature Growth at 30C; with MOPS -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4
pH pH 5 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4
pH pH 7 -0.3
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM -0.3
carbon source Delta-Undecalactone (C) -0.3
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3
nitrogen source Ammonium chloride and TNT (N) -0.3
stress R2A with Fusaric 480 ug/mL +0.3
temperature shift Temperature shift 10_to_25 +0.3
carbon source butyrate (C) +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.3
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.3
carbon source ferulate (C); with MOPS +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4
carbon source D-Glucose (C) +0.4
carbon source Crotonic (C) +0.4
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
stress Growth with Chloride 500 mM; with MOPS +0.4
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4
carbon source propionate (C) +0.4
carbon source Hexanoic (C) +0.5
carbon source Levulinic Acid (C) +0.5
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6
carbon source Levulinic Acid (C) +0.6
carbon source Hexanoic (C) +0.9
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PP_0858