Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0839
pH	Growth at pH6 and (C) Trisodium citrate	-2.1
carbon source	D-Glucose (C); with MOPS	-1.9
pH	Growth at pH6 and (C) Trisodium citrate	-1.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-1.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-1.5
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-1.4
phage	P. putida PUT10 MOI 10	-1.4
pH	Growth at pH7 and (C) Trisodium citrate	-1.4
phage	PUT8 MOI 0.1	-1.3
phage	PUT8 MOI 0.1	-1.3
carbon source	ferulate (C); with MOPS	-1.3
pH	Growth at pH8 and (C) Trisodium citrate	-1.3
pH	Growth at pH7 and (C) Trisodium citrate	-1.3
nitrogen source	nitrate (N)	-1.3
carbon source	D-Glucose (C)	-1.2
phage	PUT 8 MOI 1	-1.2
nitrogen source	NAG (N); with MOPS	-1.2
carbon source	carbon source Glycerol 108.6 mM	-1.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-1.2
phage	P. putida South MOI 1	-1.1
phage	P. putida PUT10 MOI 10	-1.1
nitrogen source	TNT (N)	-1.1
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-1.1
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-1.1
temperature shift	Temperature shift 10_to_30	-1.0
temperature shift	Temperature shift 10_to_30; with MOPS	-1.0
pH	pH 7	-1.0
micoeukaryotes	Acanthamoeba sp., muxed culture-2	-1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+1.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+1.1
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