Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0793
carbon source	D-Fructose (C)	-5.8
carbon source	D-Fructose (C)	-5.8
carbon source	D-Mannose (C)	-5.1
carbon source	D-Fructose (C)	-4.0
nitrogen source	Ammonium chloride and TNT (N)	-1.9
nitrogen source	Ammonium chloride and TNT (N)	-1.7
nitrogen source	Ammonium chloride and TNT (N)	-1.5
nitrogen source	Ammonium chloride and TNT (N)	-1.5
nitrogen source	Propandiamine (N)	-1.4
stress	MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM	-1.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.1
stress	MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM	-1.0
carbon source	3-methyl-1-butanol (C)	-1.0
carbon source	3-methyl-1-butanol (C)	-1.0
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.9
nitrogen source	TNT (N)	-0.8
stress	MOPS minimal media_Glucose20mM with Carbenicillin 100 .g/mL	-0.8
reactor	48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.8
pH	pH 9	-0.7
nitrogen source	TNT (N)	-0.7
stress	Growth with Chloride 200 mM	-0.7
nitrogen source	Propandiamine (N)	-0.7
pH	Growth at pH6 and (C) D-Glucose	-0.7
nitrogen source	TNT (N)	-0.7
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.7
stress	MOPS minimal media_Glucose20mM with Chloride 200 mM	-0.7
nitrogen source	D-2-Aminobutyric (N)	-0.6
temperature shift	Temperature shift 30_to_21; with MOPS	-0.6
phage	PUT8 MOI 0.1	+0.6
carbon source	ferulate (C); with MOPS	+0.7
		remove PP_0793