Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0773
nitrogen source	nitrogen source nitrite 1mM	-0.9
carbon source	D-Glucose (C)	-0.9
carbon source	carbon source 4-vinylphenol 0.01 mM	-0.8
pH	pH 6	-0.7
stress	R2A with Fusaric 480 ug/mL	-0.7
nitrogen source	D-2-Aminobutyric (N)	-0.7
carbon source	Delta-Decalactone (C)	-0.7
carbon source	Delta-Dodecalactone (C)	-0.7
carbon source	D-Glucose (C) 10 mM	-0.7
pH	pH 4	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	-0.6
pH	Growth at pH7 and (C) Trisodium citrate	-0.6
carbon source	L-Phenylalanine 5 mM (C)	-0.6
pH	pH 8	-0.6
carbon source	Valeric (C)	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.6
pH	D-Glucose (C) pH 6.5	-0.6
carbon source	D-Glucose (C) with 20AA_mix_minus_Cys	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.5
carbon source	carbon source 3-O-methyl-glucose 10 mM	-0.5
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-0.5
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and L-tyrosine 5 mM	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5
carbon source	ferulate (C); with MOPS	+0.6
carbon source	D-Glucose (C)	+0.6
pH	Growth at pH9 and (C) D-Glucose	+0.6
carbon source	ferulate (C); with MOPS	+0.6
stress	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL	+0.7
phage	P. putida South MOI 10	+0.7
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.8
		remove PP_0773