Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0772
carbon source	ferulate (C); with MOPS	-1.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.1
temperature	Growth at 25C	-1.0
no stress control	Growth with no stress	-1.0
r2a control	R2A control	-0.9
carbon source	D-Glucose (C)	-0.9
pH	pH 5	-0.8
carbon source	carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM	-0.8
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X	-0.8
carbon source	carbon source D-Glucose 55.5 mM	-0.7
pH	pH 8	-0.7
carbon source	L-Leucine (C)	-0.6
pH	pH 4	-0.6
carbon source	pyruvate (C)	-0.6
reactor	48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO.	-0.6
nitrogen source	Ammonium chloride (N)	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.6
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.6
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6
carbon source	D-Glucuronic Acid (C)	-0.6
phage	PUT8 MOI 0.1	-0.6
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 4-azido-L-phenylalanine 10 mM	-0.5
pH	Growth at pH7 and (C) D-Glucose	+0.6
pH	Growth at pH6 and (C) D-Glucose	+0.6
temperature shift	Temperature shift 10_to_21	+0.6
pH	Growth at pH8 and (C) D-Glucose	+0.6
reactor	40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO.	+0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	+0.7
carbon source	D-Glucose (C); with MOPS	+0.8
		remove PP_0772