Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0769
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.8
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8
phage P. putida Sci small MOI 0.1 -0.8
pH Valerolactone (C) pH 6.5 -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.8
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.7
lb LB -0.7
stress R2A with Fusaric 240 ug/mL -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6
carbon source Myristic (C) -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6
lb LB -0.6
pH Growth at pH7 and (C) Trisodium citrate -0.6
pH pH 7 +0.6
carbon source carbon source Bisabolol 45 mM +0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6
pH D-Glucose (C) pH 6 +0.6
carbon source carbon source Glycerol 108.6 mM +0.7
phage P. put South MOI 0.1 +0.7
carbon source carbon source 3-O-methyl-glucose 50 mM +0.7
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.7
pH pH 5 +0.8
carbon source carbon source D-Glucose 55.5 mM +0.8
carbon source carbon source 3-O-methyl-glucose 10 mM +0.8
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PP_0769