Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0749
pH	Growth at pH7 and (C) Trisodium citrate	-1.8
nitrogen source	NAG (N); with MOPS	-1.1
nitrogen source	Propandiamine (N)	-1.1
nitrogen source	DL-2-Aminobutyric (N)	-1.0
nitrogen source	no extra (N); with MOPS	-0.9
carbon source	3-methyl-1-butanol 0.1 vol% (C)	-0.8
nitrogen source	D-2-Aminobutyric (N)	-0.8
nitrogen source	Urea (N)	-0.7
reactor	24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.7
no stress control	Growth with no stress	-0.7
temperature	Growth at 25C; with MOPS	-0.7
nitrogen source	Beta-alanine (N)	-0.6
pH	Growth at pH9 and (C) D-Glucose	-0.6
stress	MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL	-0.6
nitrogen source	NAG (N); with MOPS	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.6
carbon source	DL-3-Hydroxyisobutyric (C)	-0.6
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6
temperature	Growth at 30C	-0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.5
carbon source	butyrate (C)	+0.6
carbon source	carbon source 3-O-methyl-glucose 50 mM	+0.6
carbon source	ferulate (C); with MOPS	+0.6
phage moi 100	Time6-phageFRS	+0.7
no phage control	Time6-nophage	+0.7
nitrogen source	nitrogen source nitrite 1mM	+0.7
stress	3-methyl-1-butanol 0.4 vol%	+0.7
stress	3-methyl-3-butenol (pure) 0.25 vol%	+0.9
stress	Butanol 0.6 vol%	+0.9
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+1.3
		remove PP_0749