Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_0748
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-1.0
pH	pH 8	-0.7
carbon source	carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM	-0.7
carbon source	1,3-Butandiol (C)	-0.7
nitrogen source	nitrogen source nitrate 5mM	-0.6
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.6
stress	R2A with Fusaric 480 ug/mL	-0.6
pH	Growth at pH8 and (C) D-Glucose	-0.6
phage	P. putida Sci small MOI 0.1	-0.6
lb outgrowth control more dilute start	LB outgrowth control more dilute start	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	-0.5
reactor	40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO.	-0.5
nitrogen source	Urea (N)	-0.5
carbon source	Myristic (C)	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5
stress	R2A with Fusaric 480 ug/mL	-0.5
carbon source	D-Glucose (C); with MOPS	-0.5
carbon source	D-Glucose (C)	-0.5
phage moi 100	Time6-phageFRS	-0.5
r2a control with 0.2% methanol	R2A control with 0.2% methanol	-0.5
carbon source	L-Leucine (C)	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.5
carbon source	L-Lysine (C)	+0.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.5
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.6
nitrogen source	D-2-Aminobutyric (N)	+0.6
micoeukaryotes	Tetrahymena sp., Mixed culture-2	+0.8
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