Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0737
micoeukaryotes Tetrahymena sp., Mixed culture-1 -1.1
carbon source Valerolactone (C) -1.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.0
temperature shift Temperature shift 10_to_25; with MOPS -0.9
nitrogen source NAG (N); with MOPS -0.9
pH Growth at pH8 and (C) D-Glucose -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8
pH Growth at pH8 and (C) Trisodium citrate -0.8
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.7
carbon source Crotonic (C) -0.6
temperature shift Temperature shift 30_to_25; with MOPS -0.6
phage P. putida PUT 7 MOI 1 -0.6
carbon source carbon source 2-Deoxy-D-glucose 10 mM +0.6
carbon source carbon source 3-O-methyl-glucose 50 mM +0.6
temperature shift Temperature shift 30_to_4 +0.7
carbon source carbon source D-Glucose 55.5 mM +0.7
pH pH 8 +0.7
carbon source carbon source Bisabolol 45 mM +0.7
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7
pH pH 4 +0.8
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.8
carbon source carbon source 3-O-methyl-glucose 10 mM +0.8
carbon source Valeric (C) +0.8
pH pH 9 +0.9
pH pH 6 +1.0
phage P. putida Sci small MOI 0.1 +1.0
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +1.1
carbon source carbon source 4-vinylphenol 0.01 mM +1.1
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PP_0737