Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0730
pH	Growth at pH6 and (C) D-Glucose	-0.3
pH	Valerolactone (C) pH 6.5	-0.3
stress	Growth with Chloride 200 mM	-0.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.2
temperature	Growth at 34C	-0.2
temperature shift	Temperature shift 30_to_25	-0.2
nitrogen source	Urea (N)	-0.2
temperature	Growth at 30C	-0.2
pH	Growth at pH7 and (C) Trisodium citrate	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.2
carbon source	carbon source 2-Deoxy-D-glucose 10 mM	-0.2
mixed carbon source	mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM	-0.2
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.2
carbon source	Nonanoic (C)	-0.2
carbon source	4-Hydroxyvalerate (C) (40mM)	+0.2
nitrogen source	nitrogen source nitrate 5mM	+0.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	+0.2
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.2
stress	MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM	+0.2
pH	Growth at pH7 and (C) Trisodium citrate	+0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.2
stress	R2A with Fusaric 240 ug/mL	+0.2
carbon source	L-Leucine (C)	+0.2
carbon source	Valeric (C)	+0.2
pH	Growth at pH6 and (C) Trisodium citrate	+0.2
nitrogen source	Imidazole (N)	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days	+0.2
carbon source	Myristic (C)	+0.3
nitrogen source	D-2-Aminobutyric (N)	+0.3
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
		remove PP_0730