Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0727
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5
temperature shift Temperature shift 30_to_10; with MOPS -0.5
nitrogen source Urea (N) -0.4
carbon source Lauric (C) -0.4
pH Growth at pH9 and (C) Trisodium citrate -0.4
nitrogen source D-2-Aminobutyric (N) -0.4
carbon source Tween 20 (C) -0.4
temperature shift Temperature shift 30_to_4; with MOPS -0.4
nitrogen source D-2-Aminobutyric (N) -0.4
pH Growth at pH6 and (C) Trisodium citrate -0.3
pH Growth at pH8 and (C) Trisodium citrate -0.3
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL -0.3
pH D-Glucose (C) pH 7 -0.3
nitrogen source Propiolactam (N) -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3
nitrogen source Urea (N); with MOPS -0.3
temperature Growth at 30C -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs +0.3
nitrogen source Ammonium chloride (N) +0.3
carbon source D-Lysine 10 mM (C) +0.3
stress 2-Ethylhexanol 0.4 vol% +0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4
carbon source ferulate (C); with MOPS +0.4
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4
carbon source L-Lysine (C) +0.4
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5
phage P. putida Sci small MOI 0.1 +0.5
carbon source 4-Aminobutyric 10 mM (C) +0.5
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PP_0727