Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0712
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.5
carbon source	carbon source D-Glucose 55.5 mM	-0.4
phage	P. putida PUT 7 MOI 1	-0.4
pH	Growth at pH6 and (C) Trisodium citrate	-0.4
carbon source	carbon source 2-Deoxy-D-glucose 10 mM	-0.4
carbon source	carbon source 3-O-methyl-glucose 10 mM	-0.4
nitrogen source	NAG (N); with MOPS	-0.3
pH	pH 8	-0.3
pH	pH 7	-0.3
carbon source	ferulate (C); with MOPS	-0.3
carbon source	D-Fructose (C)	-0.3
phage	P. put South MOI 10	-0.3
stress	MOPS minimal media_Glucose20mM with Chloride 200 mM	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.3
stress	R2A with Fusaric 240 ug/mL	-0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.3
microaerobic m9	microaerobic M9	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs	-0.3
no stress control	Growth with no stress	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	-0.3
carbon source	carbon source Bisabolol 45 mM	-0.3
carbon source	carbon source 4-vinylphenol 0.1 mM	-0.3
carbon source	L-Arginine (C)	+0.3
carbon source	3-hydroxypentanoate	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	+0.3
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3
temperature shift	Temperature shift 30_to_25	+0.3
nitrogen source	D-2-Aminobutyric (N)	+0.5
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