Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0675
carbon source	carbon source D-Glucose 55.5 mM	-0.9
no stress control	Growth with no stress	-0.7
carbon source	carbon source Bisabolene 48.9 mM	-0.7
pH	Growth at pH6 and (C) D-Glucose	-0.5
nitrogen source	nitrogen source nitrite 1mM	-0.5
nitrogen source	2,6-diaminopimelic (N)	-0.5
stress	Growth with Chloride 200 mM	-0.5
temperature	Growth at 30C; with MOPS	-0.5
phage	P. putida Sci Big MOI 0.1	-0.5
temperature shift	Temperature shift 10_to_34	-0.5
phage	PUT 8 MOI 1	-0.5
pH	Growth at pH8 and (C) D-Glucose	-0.5
temperature	Growth at 34C	-0.5
pH	pH 7	-0.5
pH	D-Glucose (C) pH 7.5	-0.5
temperature shift	Temperature shift 30_to_4	-0.4
pH	Growth at pH9 and (C) Trisodium citrate	-0.4
temperature shift	Temperature shift 30_to_21; with MOPS	-0.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.4
nitrogen source	Ammonium chloride (N)	-0.4
temperature shift	Temperature shift 10_to_30; with MOPS	-0.4
temperature	Growth at 30C	-0.4
temperature shift	Temperature shift 30_to_25; with MOPS	-0.4
temperature shift	Temperature shift 30_to_25	-0.4
pH	pH 9	-0.4
anaerobic m9	anaerobic M9	-0.4
nitrogen source	Urea (N); with MOPS	+0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.7
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.8
		remove PP_0675