Fitness for 1 genes in Pseudomonas putida KT2440

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Group	Condition	PP_0664
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.8
nitrogen source	2,6-diaminopimelic (N)	-0.7
nitrogen source	Urea (N); with MOPS	-0.5
temperature	Growth at 30C; with MOPS	-0.5
phage	P. putida Sci small MOI 0.1	-0.5
carbon source	3-methyl-1-butanol 0.25 vol% (C)	-0.5
phage	P. putida Missley MOI 0.1	-0.4
carbon source	L-Phenylalanine 5 mM (C)	-0.4
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4
nitrogen source	2,6-diaminopimelic (N)	-0.4
carbon source	L-Valine (C)	-0.4
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4
temperature shift	Temperature shift 10_to_21; with MOPS	-0.4
nitrogen source	NAG (N); with MOPS	-0.4
carbon source	2,3-Butanediol (C)	-0.4
pH	Growth at pH6 and (C) Trisodium citrate	-0.4
carbon source	carbon source 2-Deoxy-D-glucose 100 mM	-0.4
nitrogen source	Hydantoin (N)	-0.4
carbon source	L-Glutamic (C)	-0.4
pH	Growth at pH6 and (C) D-Glucose	-0.4
nitrogen source	Hydantoin (N)	-0.4
temperature shift	Temperature shift 10_to_25	-0.4
carbon source	2-Methylbutanoic (C)	-0.4
carbon source	D-Glucuronic gamma lactone (C)	-0.4
reactor	72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO.	-0.4
pH	Growth at pH6 and (C) Trisodium citrate	+0.4
mixed community	Putida_ML5X with Paraburkholderia sabiae T6SS mutant	+0.4
carbon source	Tween 20 (C)	+0.5
carbon source	Vanillin (C)	+0.5
micoeukaryotes	Tetrahymena sp., Mixed culture-2	+0.5
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