Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0662
carbon source	carbon source 4-vinylphenol 0.01 mM	-0.9
nitrogen source	NAG (N); with MOPS	-0.8
pH	pH 7	-0.7
carbon source	carbon source 2-Deoxy-D-glucose 50 mM	-0.6
carbon source	carbon source 3-O-methyl-glucose 10 mM	-0.6
carbon source	carbon source 2-Deoxy-D-glucose 10 mM	-0.6
carbon source	carbon source Bisabolene 48.9 mM	-0.5
pH	pH 9	-0.5
carbon source	carbon source 2-Deoxy-D-glucose 100 mM	-0.5
carbon source	carbon source 3-O-methyl-glucose 50 mM	-0.5
carbon source	3-Hydroxydecanoic (C)	-0.5
pH	pH 8	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.5
carbon source	carbon source Bisabolol 45 mM	-0.5
pH	pH 6	-0.5
carbon source	carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.4
phage	P. putida Sci small MOI 0.1	-0.4
phage	PUT8 MOI 0.1	-0.4
stress	R2A with Fusaric 480 ug/mL	+0.4
temperature	Growth at 30C; with MOPS	+0.4
temperature shift	Temperature shift 10_to_30; with MOPS	+0.4
carbon source	D-Glucose (C); with MOPS	+0.4
no stress control	Growth with no stress	+0.4
phage	P. putida South MOI 10	+0.4
pH	Growth at pH6 and (C) D-Glucose	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs	+0.5
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.6
carbon source	ferulate (C); with MOPS	+0.6
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