Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0659
phage	P. putida Sci small MOI 0.1	-0.8
phage	P. putida Sci small MOI 0.1	-0.5
phage	P. putida Sci Big MOI 0.1	-0.5
phage	P. putida PUT 7 MOI 1	-0.4
phage	P. putida Missley MOI 0.1	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.4
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.4
pH	pH 9	-0.4
carbon source	carbon source Bisabolol 45 mM	-0.3
temperature shift	Temperature shift 10_to_25; with MOPS	-0.3
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.3
temperature shift	Temperature shift 30_to_21; with MOPS	-0.3
carbon source	Trisodium citrate (C)	-0.3
pH	Growth at pH8 and (C) Trisodium citrate	-0.3
nitrogen source	Propandiamine (N)	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3
stress	Butanol 0.6 vol%	-0.3
carbon source	3-methyl-1-butanol 0.25 vol% (C)	+0.3
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3
phage	P. putida South MOI 10	+0.3
carbon source	Myristic (C)	+0.3
carbon source	L-Isoleucine (C)	+0.3
carbon source	Tween 20 (C)	+0.3
micoeukaryotes	Tetrahymena sp., Mixed culture-2	+0.4
nitrogen source	L-Ornithine (N)	+0.4
carbon source	L-Lysine (C)	+0.4
nitrogen source	L-Lysine (N)	+0.5
nitrogen source	L-Ornithine (N)	+0.6
nitrogen source	L-Lysine (N)	+0.6
carbon source	L-Alanine (C)	+1.4
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