Fitness for 1 genes in Pseudomonas putida KT2440

Add gene:

Top 30 experiments (either direction), sorted by average fitness

Or view all 989 experiments or choose conditions

Group Condition PP_0654
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7
temperature Growth at 25C; with MOPS -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6
nitrogen source NAG (N); with MOPS -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4
temperature shift Temperature shift 10_to_25; with MOPS -0.4
nitrogen source NAG (N) -0.4
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.4
pH Growth at pH7 and (C) D-Glucose -0.4
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.4
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.4
stress MOPS minimal media_Glucose20mM with Poly(3-hydroxybutyric) 0.1 mg/mL -0.4
nitrogen source Ammonium chloride (N) +0.4
carbon source D-Glucaric (C) +0.4
carbon source 2,3-Butanediol (C) +0.4
mixed carbon source mixed (C)s Trisodium citrate 10 mM and Parachlorophenylalanine 10 mM +0.4
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM +0.4
carbon source acetate (C) +0.4
temperature shift Temperature shift 30_to_25; with MOPS +0.4
carbon source Acetate Carbon Source (20mM) +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.6
pH Growth at pH6 and (C) D-Glucose +0.6
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.6
remove
PP_0654