Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0591
pH pH 6 -1.0
nitrogen source DL-2-Aminobutyric (N) -0.9
phage P. putida PUT 7 MOI 1 -0.8
carbon source 4-Methyl-2-oxopentanoic (C) -0.8
nitrogen source DL-2-Aminobutyric (N) -0.7
carbon source D-Glucose (C) -0.7
nitrogen source NAG (N); with MOPS -0.7
carbon source carbon source 3-O-methyl-glucose 50 mM -0.7
carbon source carbon source Bisabolol 45 mM -0.7
nitrogen source nitrate (N) -0.6
nitrogen source Ammonium chloride (N) -0.6
carbon source Valeric (C) -0.6
temperature Growth at 30C; with MOPS -0.6
pH Growth at pH6 and (C) Trisodium citrate -0.6
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6
pH Growth at pH9 and (C) Trisodium citrate -0.6
pH pH 9 -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.5
nitrogen source Adenine (N) -0.5
carbon source D-Glucose (C) -0.5
carbon source ferulate (C); with MOPS -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5
phage PUT 8 MOI 1 -0.5
pH D-Glucose (C) pH 6.5 +0.5
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.5
carbon source 2-Methylbutanoic (C) +0.5
stress 3-methyl-1-butanol 0.4 vol% +0.6
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8
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PP_0591