Fitness for 1 genes in Pseudomonas putida KT2440

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PP_0586
nitrogen source	Ammonium chloride and TNT (N)	-1.6
nitrogen source	Ammonium chloride and TNT (N)	-1.1
nitrogen source	Ammonium chloride and TNT (N)	-1.1
nitrogen source	Ammonium chloride and TNT (N)	-1.1
carbon source	L-Leucine (C)	-0.8
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.6
carbon source	Phenylacetic (C)	-0.6
carbon source	Crotonic (C)	-0.6
pH	Growth at pH7 and (C) Trisodium citrate	-0.6
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs	-0.5
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs	-0.5
carbon source	Vanillin (C)	-0.5
carbon source	Protocatechuic Acid (C)	-0.5
carbon source	Protocatechuic Acid (C)	-0.5
carbon source	Vanillin (C)	-0.5
carbon source	Ferulic Acid (C)	-0.5
temperature	Growth at 30C; with MOPS	-0.4
carbon source	p-Coumaric (C)	-0.4
stress	MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM	-0.4
carbon source	Levulinic Acid (C)	-0.4
pH	Growth at pH6 and (C) Trisodium citrate	-0.4
nitrogen source	Propandiamine (N)	-0.4
phage	P. putida Sci small MOI 0.1	+0.4
nitrogen source	D-2-Aminobutyric (N)	+0.4
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.4
pH	Growth at pH9 and (C) Trisodium citrate	+0.5
nitrogen source	nitrogen source nitrite 1mM	+0.5
nitrogen source	D-2-Aminobutyric (N)	+0.5
phage	P. putida Sci small MOI 0.1	+0.6
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