Fitness for 1 genes in Pseudomonas putida KT2440

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Group Condition PP_0567
nitrogen source Propandiamine (N) -5.6
nitrogen source Propandiamine (N) -5.3
carbon source 3-methyl-1-butanol 0.1 vol% (C) -1.2
carbon source Decanoic (C) -1.2
carbon source 1-Pentanol (C) -1.0
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9
supernatant LB 0.1x with 55.5 mM D-Glucose with Supernatant: Acinetobacter -0.9
nitrogen source L-Arginine (N) -0.8
carbon source Delta-Nonalactone (C) -0.7
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.7
nitrogen source L-Arginine (N) -0.7
carbon source Delta-Decalactone (C) -0.7
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.7
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6
stress R2A with Fusaric 240 ug/mL -0.6
stress Growth with Chloride 500 mM; with MOPS -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.6
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.5
stress Cholinium glutamate 10 vol% -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.5
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5
carbon source Vanillic Acid (C) -0.5
nitrogen source DL-2-Aminobutyric (N) +0.6
nitrogen source D-2-Aminobutyric (N) +0.9
nitrogen source D-2-Aminobutyric (N) +0.9
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PP_0567